Data availability All E. coli CC38 sequence data generated as part of the Danish National Surveillance that have not previously been published are deposited in […]
Category: Genomic
Genomic insights into novelBurkholderia sp. Bmkn7 from coastal saline-affected rice fields unveils potential antimicrobial metabolites and plant growth-promoting traits
References Bukhat, S. et al. Communication of plants with microbial world: exploring the regulatory networks for PGPR mediated defense signaling. Microbiol. Res. 238, 126486 (2020). […]
Genomic language model mitigates chimera artifacts in nanopore direct RNA sequencing
Data availability Raw and processed data generated in this study, including dRNA-seq using the SQK-RNA002 and SQK-RNA004 kits, as well as direct cDNA sequencing of […]
Genomic discrimination of the botanical groups conilon and robusta of Coffea canephora
References Ferrão, M. A. G., Ferrão, R. G., Fonseca, A. F. A., da Verdin Filho, A. C. & Volpi, P. S. Origin, geographical dispersion, taxonomy […]
Genomic insights into a novel species, Dyella thailandensis sp. nov., a cellulolytic and xylanolytic bacterium isolated from soil associated with leaf compost
Introduction Lignocellulosic biomass is the most globally abundant renewable carbon source, primarily composed of cellulose, hemicellulose, and lignin. Its complex and recalcitrant structure poses a […]
Genomic and metabolomic insights into Trichoderma harzianum T9, a resilient biocontrol fungus from arid environments
References Sariah, M., Choo, C. W., Zakaria, H. & Norihan, M. S. Quantification and characterisation of Trichoderma spp. From different ecosystems. Mycopathologia 159, 113–117 (2005). […]
Genomic analysis unlocks the potential of denosumab as a targeted therapy for Crohn’s disease
Introduction Crohn’s disease (CD) is a progressive, relapsing, chronic inflammatory disease of the gastrointestinal tract, commonly affecting the terminal ileum and proximal colon as discontinuous, […]
Genomic resources of Cold-adapted Mrakia yeasts and their potential biotechnological applications
References Tsuji, M., Kudoh, S. & Hoshino, T. Fungi in extreme environments: ecological role and biotechnological significance. Fungi Extrem Environ. Ecol. Role Biotechnol. Significance. https://doi.org/10.1007/978-3-030-19030-9 […]
Genomic insights into biosynthetic gene cluster diversity and structural variability in marine bacteria
Introduction Bioactive compounds play a crucial role in various biological and ecological processes, with applications extending beyond human health to agriculture, biotechnology, and environmental sustainability1. […]
Genomic insertion of ancestral uricase into human liver cells to determine metabolic consequences of pseudogenization
Introduction Urate (the biological form of uric acid) is a highly insoluble small molecule that is responsible for gouty arthritis and organ damage (kidney and […]